Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline-sulfatase | SPO_RS05495 | Not Available | Positive | 1138106 - 1139614 | 57431.2 |
| nuclear transport factor 2 family protein | SPO_RS05500 | Not Available | Positive | 1139765 - 1140124 | 13460.0 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | SPO_RS05505 | Not Available | Negative | 1140145 - 1140951 | 27807.4 |
| choline-responsive transcriptional repressor beti | SPO_RS05510 | Q985M2 | Negative | 1141117 - 1141698 | 21594.9 |
| bcct family transporter | SPO_RS05515 | Not Available | Positive | 1141870 - 1143066 | 44227.9 |
| choline dehydrogenase | SPO_RS05520 | A6X2G7 | Positive | 1143149 - 1144807 | 60080.3 |
| ydch family protein | SPO_RS05525 | Not Available | Positive | 1144930 - 1145169 | 9181.87 |
| short-chain fatty acyl-coa regulator family protein | SPO_RS05530 | Q3J4E6 | Negative | 1145242 - 1146639 | 51620.4 |
| ycii family protein | SPO_RS05535 | Not Available | Negative | 1146709 - 1146996 | 10620.8 |
| lysr family transcriptional regulator | SPO_RS05540 | Not Available | Positive | 1147094 - 1147996 | 32645.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
