Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | SPO_RS05445 | Not Available | Positive | 1128889 - 1129833 | 32702.4 |
| tripartite tricarboxylate transporter tctb family protein | SPO_RS05450 | Not Available | Positive | 1129844 - 1130272 | 15554.0 |
| tripartite tricarboxylate transporter permease | SPO_RS05455 | P70795 | Positive | 1130296 - 1131801 | 52003.2 |
| slc13 family permease | SPO_RS05460 | P72958 | Positive | 1131861 - 1133636 | 61768.5 |
| nitroreductase family protein | SPO_RS05465 | F4KU78 | Negative | 1133707 - 1134399 | 25473.3 |
| argp/lysg family dna-binding transcriptional regulator | SPO_RS05470 | P67666 | Negative | 1134437 - 1135321 | 31006.3 |
| lyse/argo family amino acid transporter | SPO_RS05475 | P64904 | Positive | 1135413 - 1136024 | 21559.8 |
| dmt family transporter | SPO_RS05480 | Not Available | Positive | 1136092 - 1137003 | 32530.2 |
| duf1036 domain-containing protein | SPO_RS05485 | Not Available | Positive | 1137062 - 1137475 | 15238.0 |
| choline-responsive transcriptional repressor beti | SPO_RS05490 | C0RHQ4 | Positive | 1137537 - 1138109 | 20827.3 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
