Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | SPO_RS05345 | Not Available | Negative | 1105456 - 1105938 | 17629.9 |
| duf1772 domain-containing protein | SPO_RS05350 | Not Available | Negative | 1106014 - 1106523 | 18635.4 |
| duf4345 domain-containing protein | SPO_RS05355 | Not Available | Negative | 1106580 - 1107008 | 14448.2 |
| nmra family nad(p)-binding protein | SPO_RS05360 | Q4WZ69 | Negative | 1107038 - 1107865 | 28987.5 |
| arac family transcriptional regulator | SPO_RS05365 | Not Available | Positive | 1108041 - 1109039 | 36400.6 |
| lysophospholipid acyltransferase family protein | SPO_RS05370 | Not Available | Negative | 1109194 - 1110069 | 32573.3 |
| serine/threonine-protein kinase | SPO_RS22140 | Q9KIG4 | Positive | 1110839 - 1112878 | 71871.7 |
| transporter substrate-binding domain-containing protein | SPO_RS05380 | Not Available | Positive | 1112982 - 1114358 | 48021.4 |
| lysm peptidoglycan-binding domain-containing protein | SPO_RS05385 | Not Available | Positive | 1114442 - 1115542 | 40095.2 |
| lysm peptidoglycan-binding domain-containing protein | SPO_RS05390 | Not Available | Positive | 1115807 - 1116898 | 39481.5 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
