Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SPO_RS05120 | P22731 | Negative | 1066985 - 1067740 | 27447.0 |
| abc transporter atp-binding protein | SPO_RS05125 | Not Available | Negative | 1067810 - 1068565 | 27505.5 |
| branched-chain amino acid abc transporter permease | SPO_RS05130 | Not Available | Negative | 1068578 - 1069780 | 44026.6 |
| branched-chain amino acid abc transporter permease | SPO_RS05135 | Not Available | Negative | 1069784 - 1070815 | 36987.4 |
| substrate-binding protein | SPO_RS05140 | Not Available | Negative | 1070920 - 1072272 | 47343.8 |
| helix-turn-helix transcriptional regulator | SPO_RS05145 | Not Available | Positive | 1072501 - 1073799 | 46969.2 |
| response regulator transcription factor | SPO_RS05150 | Q4A160 | Positive | 1073885 - 1074265 | 13969.9 |
| hypothetical protein | SPO_RS05155 | Not Available | Positive | 1074262 - 1074567 | 11048.5 |
| sensor histidine kinase | SPO_RS05160 | P21865 | Positive | 1074564 - 1077242 | 95894.2 |
| flim/flin family flagellar motor c-terminal domain-containing protein | SPO_RS05165 | Not Available | Positive | 1077324 - 1078487 | 41779.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
