Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent deacylase | SPO_RS04915 | Q9A2S6 | Negative | 1030330 - 1031028 | 24807.4 |
| low molecular weight protein-tyrosine-phosphatase | SPO_RS04920 | O35016 | Positive | 1031073 - 1031534 | 16380.6 |
| lysr family transcriptional regulator | SPO_RS04925 | P0ACQ8 | Negative | 1031809 - 1032774 | 35435.3 |
| histidinol dehydrogenase | SPO_RS04930 | Q5LUS2 | Positive | 1032852 - 1034153 | 45355.1 |
| hypothetical protein | SPO_RS04935 | Not Available | Negative | 1034201 - 1034518 | 11445.8 |
| hypothetical protein | SPO_RS23065 | Not Available | Negative | 1034804 - 1036051 | 43426.2 |
| translation elongation factor 4 | SPO_RS04950 | Q5LUS0 | Positive | 1036158 - 1037957 | 66693.5 |
| metal abc transporter permease | SPO_RS04955 | P39832 | Negative | 1038961 - 1039755 | 26600.5 |
| metal abc transporter atp-binding protein | SPO_RS04960 | Q5LUR8 | Negative | 1039755 - 1040525 | 27297.8 |
| transcriptional repressor | SPO_RS04965 | P0AC51 | Negative | 1040522 - 1041001 | 17324.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
