Methylococcus capsulatus str. Bath

Gram-negativeCocciNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylococcus

Description

Methylococcus capsulatus strain Bath is a Gram-negative, aerobic methanotrophic bacterium characterized by its cocci shape and lack of mobility, as it does not possess flagella. This organism thrives in multiple habitats and is classified as thermophilic, with an optimal growth temperature of 45°C. Methylococcus capsulatus str. Bath has a unique cellular structure, comprising two membranes and a single replicon. As a methanotroph, this bacterium utilizes methane as its primary energy source, playing a significant role in the carbon cycle by converting methane into biomass and other metabolites. Its ability to degrade methane contributes to mitigating greenhouse gas emissions, highlighting its ecological importance. The free-living nature of Methylococcus capsulatus str. Bath allows it to occupy diverse environments, potentially enhancing the microbial diversity and resilience of those ecosystems. Moreover, this strain is not pathogenic, which makes it a model organism for studying methanotrophic metabolism and its applications in bioremediation and biotechnology. The accession number for this strain is NC_002977.6, facilitating further research and exploration into its genetic and biochemical properties. Overall, Methylococcus capsulatus str. Bath exemplifies an essential microbial player in both ecological contexts and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylococcus
SpeciesMethylococcus capsulatus
StrainBath

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Methylococcus capsulatus str. Bath
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature45
Temperature rangeThermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceMethanotroph
PathogenicityNo

Genome Summary

Methylococcus capsulatus str. Bath, complete sequence.

Gene Summary

Adenine Count

602607 bp

Thymine Count

600762 bp

Guanine Count

1047576 bp

Cytosine Count

1053615 bp

Genome Length

3304561 bp

Protein-coding Genes

2962 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome ubiquinol oxidase subunit iMCA_RS05440Not AvailablePositive1160863 - 116244058202.6
cytochrome d ubiquinol oxidase subunit iiMCA_RS05445Not AvailablePositive1162460 - 116359640971.8
cytochrome bd-i oxidase subunit cydxMCA_RS15650Not AvailablePositive1163628 - 11637504312.12
pepsy-like domain-containing proteinMCA_RS05455Not AvailablePositive1163835 - 11641109917.8
alpha-ketoglutarate-dependent dioxygenase alkbMCA_RS05460Not AvailablePositive1164203 - 116478421926.2
glucan biosynthesis proteinMCA_RS05465Not AvailableNegative1164796 - 116637658922.3
sulfite exporter taue/safe family proteinMCA_RS05470Not AvailableNegative1166486 - 116726827284.6
tvp38/tmem64 family proteinMCA_RS05475Not AvailablePositive1167489 - 116816924133.2
histidinol-phosphate transaminaseMCA_RS05480Not AvailableNegative1168166 - 116923939515.5
type ii secretion system atpase gspeMCA_RS05490Not AvailablePositive1169534 - 117129164198.9

Displaying genes 1221 – 1230 of 3095 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

247 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da

Displaying 1–10 of 247 metabolites

Health Effects

No health effects information available for this bacterium.