[Haemophilus] ducreyi 35000HP

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Haemophilus

Description

Haemophilus ducreyi 35000HP is a Gram-negative bacterium known for its role as the causative agent of chancroid, a sexually transmitted infection. This organism is characterized by its anaerobic oxygen requirement, meaning it thrives in environments devoid of oxygen. Notably, H. ducreyi possesses flagella, which are tail-like structures that facilitate movement, allowing the bacterium to navigate its ecological niche. The genomic structure of H. ducreyi 35000HP includes a single replicon, as indicated by its accession number NC_002940.2, which suggests a streamlined genetic organization typical of many pathogenic bacteria. This single replicon may contribute to efficient replication and expression of genes necessary for its survival and virulence. In terms of ecological insight, the anaerobic nature of H. ducreyi influences its habitat preferences, often leading it to colonize mucosal surfaces where oxygen levels are low. The presence of flagella may also enhance its ability to establish infections in such environments. Understanding the traits of H. ducreyi 35000HP is crucial for developing targeted interventions and treatments for infections caused by this bacterium, as well as for comprehending its role in human health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHaemophilus
Species[Haemophilus] ducreyi
Strain35000HP

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Haemophilus] ducreyi 35000HP
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Haemophilus] ducreyi 35000HP, complete sequence.

Gene Summary

Adenine Count

518691 bp

Thymine Count

530915 bp

Guanine Count

334825 bp

Cytosine Count

314524 bp

Genome Length

1698955 bp

Protein-coding Genes

1511 genes

Non-Coding Genes

178 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murein biosynthesis integral membrane protein murjHD_RS08155P44958Negative1653949 - 165551757598.6
30s ribosomal protein s20HD_RS08160Q7VKC6Positive1655878 - 16561419636.96
trk system potassium transporter trkaHD_RS08165P71354Negative1656198 - 165757450496.4
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbHD_RS08170Q7VKC4Negative1657574 - 165888148722.6
selenocysteine-specific translation elongation factorHD_RS08175P43927Negative1658931 - 166079970433.4
l-seryl-trna(sec) selenium transferaseHD_RS08180Q7VKC2Negative1660796 - 166217850395.5
Trna-sec(p)Not AvailableNot AvailablePositive1662251 - 1662345Not Available
fmn-binding protein miocHD_RS08190P44813Positive1662462 - 166291716672.6
signal recognition particle proteinHD_RS08195P44518Negative1662997 - 166434950107.7
phosphoribosylformylglycinamidine synthaseHD_RS08200P71369Negative1664480 - 166568944428.6

Displaying genes 1651 – 1660 of 1689 in total

Metabolites

1674 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 1674 metabolites

Health Effects

No health effects information available for this bacterium.