[Haemophilus] ducreyi 35000HP

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Haemophilus

Description

Haemophilus ducreyi 35000HP is a Gram-negative bacterium known for its role as the causative agent of chancroid, a sexually transmitted infection. This organism is characterized by its anaerobic oxygen requirement, meaning it thrives in environments devoid of oxygen. Notably, H. ducreyi possesses flagella, which are tail-like structures that facilitate movement, allowing the bacterium to navigate its ecological niche. The genomic structure of H. ducreyi 35000HP includes a single replicon, as indicated by its accession number NC_002940.2, which suggests a streamlined genetic organization typical of many pathogenic bacteria. This single replicon may contribute to efficient replication and expression of genes necessary for its survival and virulence. In terms of ecological insight, the anaerobic nature of H. ducreyi influences its habitat preferences, often leading it to colonize mucosal surfaces where oxygen levels are low. The presence of flagella may also enhance its ability to establish infections in such environments. Understanding the traits of H. ducreyi 35000HP is crucial for developing targeted interventions and treatments for infections caused by this bacterium, as well as for comprehending its role in human health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHaemophilus
Species[Haemophilus] ducreyi
Strain35000HP

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Haemophilus] ducreyi 35000HP
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Haemophilus] ducreyi 35000HP, complete sequence.

Gene Summary

Adenine Count

518691 bp

Thymine Count

530915 bp

Guanine Count

334825 bp

Cytosine Count

314524 bp

Genome Length

1698955 bp

Protein-coding Genes

1511 genes

Non-Coding Genes

178 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoprotein nlpiHD_RS06460P44585Positive1310704 - 131163636170.4
dead/deah box helicaseHD_RS06465P44586Positive1311864 - 131368469148.0
trna adenosine(34) deaminase tadaHD_RS06470P44931Positive1313765 - 131428919476.7
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtHD_RS06475Q7VL87Negative1314325 - 131489420618.2
pyridoxal 5'-phosphate synthase lyase subunit pdxsHD_RS06480Q7VL86Negative1314894 - 131578131878.0
phosphoribosylformylglycinamidine synthaseHD_RS06485Not AvailablePositive1315884 - 131728250381.4
ribosome recycling factorHD_RS06490Q7VL83Negative1317344 - 131790120768.0
ump kinaseHD_RS06495Q7VL82Negative1318115 - 131882825784.6
phosphoethanolamine transferaseHD_RS06500P71367Positive1318942 - 132052559633.0
translation elongation factor tsHD_RS06505Q7VL80Negative1320591 - 132144230291.5

Displaying genes 1311 – 1320 of 1689 in total

Metabolites

1674 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 1674 metabolites

Health Effects

No health effects information available for this bacterium.