Mesorhizobium japonicum MAFF 303099

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Mesorhizobium

Description

Mesorhizobium japonicum MAFF 303099 is a Gram-negative bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This species is classified as an aerobe, indicating that it requires oxygen for growth and metabolism. Mesorhizobium japonicum is mesophilic, thriving in moderate temperature ranges, which is typical for many soil-dwelling microorganisms. One of the most significant traits of Mesorhizobium japonicum MAFF 303099 is its symbiotic relationship with leguminous plants, particularly soybeans. In this mutualistic association, the bacterium helps fix atmospheric nitrogen, converting it into a form that plants can assimilate. In return, the plant provides carbohydrates and a suitable environment for the bacterium to thrive. This interaction is crucial for soil fertility and contributes to sustainable agricultural practices, as it reduces the need for synthetic nitrogen fertilizers. With a single replicon, Mesorhizobium japonicum MAFF 303099 is genetically streamlined, which may facilitate efficient replication and adaptation to its ecological niche. The diverse habitats in which it can be found underscore its ecological versatility and importance in various ecosystems, particularly in agricultural contexts where it plays a key role in enhancing soil nitrogen levels and promoting plant health. This highlights the significance of such bacteria in maintaining ecological balance and supporting agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusMesorhizobium
SpeciesMesorhizobium japonicum
StrainMAFF 303099

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Mesorhizobium japonicum MAFF 303099
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium japonicum MAFF 303099


Gene Summary

Adenine Count

71239 bp

Thymine Count

72037 bp

Guanine Count

104879 bp

Cytosine Count

103756 bp

Genome Length

351911 bp

Protein-coding Genes

344 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMAFF_RS39620Not AvailablePositive142 - 201368124.6
is110 family transposaseMAFF_RS34905Not AvailablePositive2138 - 325642205.2
hypothetical proteinMAFF_RS39845Not AvailableNegative3881 - 41389280.01
hypothetical proteinMAFF_RS41025Not AvailablePositive4325 - 45919561.8
fad-dependent oxidoreductaseMAFF_RS34915Not AvailableNegative4625 - 614854616.7
hypothetical proteinMAFF_RS38655Not AvailableNegative6158 - 653213443.7
dmt family transporterMAFF_RS34920Not AvailableNegative6534 - 688712444.6
nad-dependent epimerase/dehydratase family proteinMAFF_RS34925Not AvailableNegative6884 - 793338416.4
hypothetical proteinMAFF_RS34930Not AvailableNegative8745 - 923017331.1
iclr family transcriptional regulatorMAFF_RS34935Not AvailableNegative9609 - 1041228946.9

Displaying genes 1 – 10 of 344 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2040 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 2040 metabolites

Health Effects

No health effects information available for this bacterium.