Mesorhizobium japonicum MAFF 303099

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Mesorhizobium

Description

Mesorhizobium japonicum MAFF 303099 is a Gram-negative, rod-shaped bacterium known for its role in symbiotic nitrogen fixation in leguminous plants. As an aerobic organism, it thrives in environments where oxygen is readily available, which aligns with its metabolic requirements for growth and activity. This strain has been isolated from diverse habitats, demonstrating its adaptability to various environmental conditions. M. japonicum is particularly significant in agricultural contexts due to its ability to form root nodules in association with soybean plants, facilitating the conversion of atmospheric nitrogen into a form that is accessible to the host. This not only enhances the nutrient availability for the plants but also contributes to soil fertility and sustainability in agricultural practices. The ability of M. japonicum MAFF 303099 to inhabit multiple environments suggests a robust physiological capacity that may allow it to withstand varying soil conditions and compete effectively for resources with other microbial communities. Understanding its traits and ecological interactions could provide insights into improving crop yields and developing sustainable agricultural systems, particularly in nitrogen-deficient soils.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusMesorhizobium
SpeciesMesorhizobium japonicum
StrainMAFF 303099

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Mesorhizobium japonicum MAFF 303099
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium japonicum MAFF 303099


Gene Summary

Adenine Count

71239 bp

Thymine Count

72037 bp

Guanine Count

104879 bp

Cytosine Count

103756 bp

Genome Length

351911 bp

Protein-coding Genes

344 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinMAFF_RS39620Not Available+142 - 201368124.6
is110 family transposaseMAFF_RS34905Not Available+2138 - 325642205.2
hypothetical proteinMAFF_RS39845Not Available-3881 - 41389280.01
hypothetical proteinMAFF_RS41025Not Available+4325 - 45919561.8
fad-dependent oxidoreductaseMAFF_RS34915Not Available-4625 - 614854616.7
hypothetical proteinMAFF_RS38655Not Available-6158 - 653213443.7
dmt family transporterMAFF_RS34920Not Available-6534 - 688712444.6
nad-dependent epimerase/dehydratase family proteinMAFF_RS34925Not Available-6884 - 793338416.4
hypothetical proteinMAFF_RS34930Not Available-8745 - 923017331.1
iclr family transcriptional regulatorMAFF_RS34935Not Available-9609 - 1041228946.9

Displaying genes 1 – 10 of 344 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2040 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 2040 metabolites