Subtercola boreus strain P28004

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Subtercola

Description

Subtercola boreus strain P28004 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NBXE00000000.1, providing a reference for further studies and comparative analysis within the genus Subtercola. The streamlined genomic configuration with a single replicon may suggest a simplified regulatory network, potentially impacting its adaptability and metabolic capabilities. While specific phenotypic traits and ecological roles of Subtercola boreus strain P28004 are not provided, the characteristics of related bacteria in the genus Subtercola often point to a role in soil ecosystems, where they may contribute to nutrient cycling or organic matter decomposition. Understanding the genomic organization of strain P28004 can offer insights into its ecological function, as bacteria with single replicons may exhibit different survival strategies compared to those with multiple replicons. Overall, the genomic simplicity of Subtercola boreus strain P28004 could be a factor in its ecological interactions, particularly in soil environments where efficient resource utilization is critical. Further research into this strain could illuminate its specific contributions to soil health and microbial diversity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusSubtercola
SpeciesSubtercola boreus
Strainstrain P28004

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subtercola boreus strain P28004 contig00120, whole genome shotgun

Gene Summary

Adenine Count

614028 bp

Thymine Count

612372 bp

Guanine Count

1254042 bp

Cytosine Count

1245239 bp

Genome Length

3725681 bp

Protein-coding Genes

3326 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
disulfide bond formation protein dsbaB7R25_05825Not AvailableNegative1236200 - 123682923381.4
polyisoprenoid-binding proteinB7R25_05830Not AvailablePositive1236945 - 123749919819.2
hypothetical proteinB7R25_05835Not AvailablePositive1237656 - 123913152039.0
hypothetical proteinB7R25_05840Not AvailableNegative1239392 - 124047439521.4
acp synthaseB7R25_05845Not AvailableNegative1240496 - 124150937541.6
hypothetical proteinB7R25_05850Not AvailablePositive1241772 - 124253328125.1
abc transporter atp-binding proteinB7R25_05855Not AvailablePositive1242649 - 124346129178.3
abc transporter permeaseB7R25_05860Not AvailablePositive1243520 - 124421824415.5
glycine/betaine abc transporter permeaseB7R25_05865Not AvailablePositive1244215 - 124495225622.0
glycine/betaine abc transporterB7R25_05870Not AvailablePositive1244954 - 124588932171.7

Displaying genes 1131 – 1140 of 3377 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.