Sediminicola luteus strain HQA918

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Sediminicola

Description

Sediminicola luteus strain HQA918 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain exhibits psychrotolerance, with an optimal growth temperature of 16°C, allowing it to thrive in colder environments. Notably, it does not form spores, which may be a key factor in its ecological niche and survival strategy. The organism is classified with a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in specific habitats. The accessions for this strain are cataloged under NBWU00000000.1, providing a reference point for further research and characterization. The psychrotolerant nature of Sediminicola luteus strain HQA918 suggests its potential role in cold environments, such as polar regions or deep-sea ecosystems, where it may participate in biogeochemical cycles. Its aerobic metabolism indicates a reliance on oxygen for energy production, which could be significant in the context of organic matter decomposition in cold aquatic systems. Understanding the ecological role of this bacterium could shed light on microbial interactions and nutrient cycling in low-temperature environments, contributing to our overall knowledge of microbial life in extreme conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSediminicola
SpeciesSediminicola luteus
Strainstrain HQA918

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sediminicola luteus strain HQA918 contig12, whole genome shotgun

Gene Summary

Adenine Count

1293185 bp

Thymine Count

1259561 bp

Guanine Count

979343 bp

Cytosine Count

1033474 bp

Genome Length

4565563 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfatase-modifying factor proteinB7P33_00635Not AvailablePositive157917 - 15874431133.2
dehydrogenaseB7P33_00640Not AvailablePositive158807 - 16013549104.6
xylose isomeraseB7P33_00645Not AvailablePositive160140 - 16105733872.5
hypothetical proteinB7P33_00650Not AvailablePositive161326 - 16250145721.2
hypothetical proteinB7P33_00660Not AvailablePositive163933 - 16516847132.9
response regulatorB7P33_00665Not AvailablePositive165182 - 16555313722.8
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabB7P33_00670Not AvailablePositive165700 - 16714554546.1
sigma-54-dependent fis family transcriptional regulatorB7P33_00675Not AvailablePositive167163 - 16843748012.3
hypothetical proteinB7P33_00680Not AvailablePositive168434 - 16897019860.4
hypothetical proteinB7P33_00685Not AvailablePositive168993 - 17015343981.4

Displaying genes 131 – 140 of 3819 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.