Pseudomonas putida strain DZ-F23

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain DZ-F23 is a gram-negative, rod-shaped bacterium that thrives in soil and wastewater environments. This organism is classified as a heterotroph, utilizing organic compounds as its energy source. It exhibits facultative anaerobic characteristics, allowing it to adapt to varying oxygen levels. The cells are typically found as singles and possess flagella, which contribute to their mobility. Strain DZ-F23 is mesophilic, indicating that it grows optimally at moderate temperatures. It contains a single replicon and is characterized by a double membrane structure, consistent with its classification within the Pseudomonas genus. Notably, this strain is free-living and has a diverse range of potential hosts, including various plants (e.g., Triticum aestivum, Solanum lycopersicum, Oryza sativa) and animals (e.g., Homo sapiens, Struthio camelus). While Pseudomonas putida is primarily known for its beneficial roles in bioremediation and plant growth promotion, it has also been associated with nosocomial infections in animals, highlighting its potential pathogenicity. This dual role underscores the ecological importance of strain DZ-F23, as it can contribute to both the health of ecosystems and the risk of disease in specific contexts. Understanding this balance is vital for managing its presence in agricultural and clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain DZ-F23

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain DZ-F23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain DZ-F23 BN4_667_1__paired__contig_120,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5514 genes

Non-Coding Genes

310 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoglycerate mutase (2,3-diphosphoglycerate-independent)B7H19_02345Not AvailableNegative528528 - 53006355185.5
sulfurtransferaseB7H19_02350Not AvailablePositive530271 - 53068414840.4
glutaredoxin 3B7H19_02355Not AvailablePositive530686 - 5309409226.2
protein-export protein secbB7H19_02360Not AvailablePositive530980 - 53146517755.0
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlB7H19_02365Not AvailableNegative531621 - 53208217027.4
hypothetical proteinB7H19_02370Not AvailablePositive532081 - 53251816142.5
nitrogen regulation protein nr(i)B7H19_02375Not AvailableNegative532876 - 53431253165.5
pas domain-containing sensor histidine kinaseB7H19_02380Not AvailableNegative534309 - 53539440073.5
type i glutamate--ammonia ligaseB7H19_02385Not AvailableNegative535760 - 53716651722.2
trna 4-thiouridine(8) synthase thiiB7H19_02390Not AvailablePositive537591 - 53904554934.6

Displaying genes 801 – 810 of 5826 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total