Pseudomonas putida strain DZ-F23

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain DZ-F23 is a gram-negative, rod-shaped bacterium that thrives in soil and wastewater environments. This organism is classified as a heterotroph, utilizing organic compounds as its energy source. It exhibits facultative anaerobic characteristics, allowing it to adapt to varying oxygen levels. The cells are typically found as singles and possess flagella, which contribute to their mobility. Strain DZ-F23 is mesophilic, indicating that it grows optimally at moderate temperatures. It contains a single replicon and is characterized by a double membrane structure, consistent with its classification within the Pseudomonas genus. Notably, this strain is free-living and has a diverse range of potential hosts, including various plants (e.g., Triticum aestivum, Solanum lycopersicum, Oryza sativa) and animals (e.g., Homo sapiens, Struthio camelus). While Pseudomonas putida is primarily known for its beneficial roles in bioremediation and plant growth promotion, it has also been associated with nosocomial infections in animals, highlighting its potential pathogenicity. This dual role underscores the ecological importance of strain DZ-F23, as it can contribute to both the health of ecosystems and the risk of disease in specific contexts. Understanding this balance is vital for managing its presence in agricultural and clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain DZ-F23

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain DZ-F23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain DZ-F23 BN4_667_1__paired__contig_120,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5514 genes

Non-Coding Genes

310 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein kinaseB7H19_29085Not AvailableNegative6013390 - 601506062137.5
nark family nitrate/nitrite mfs transporterB7H19_29090Not AvailableNegative6015070 - 601628142328.2
gntr family transcriptional regulatorB7H19_29115Not AvailableNegative6017586 - 601827525435.7
hypothetical proteinB7H19_29120Not AvailablePositive6018548 - 601924025892.3
hypothetical proteinB7H19_29125Not AvailablePositive6019251 - 602119771238.2
hlyd family type i secretion periplasmic adaptor subunitB7H19_29130Not AvailableNegative6021354 - 602273051013.8
type i secretion system permease/atpaseB7H19_29135Not AvailableNegative6022720 - 602487678588.6
hypothetical proteinB7H19_29145Not AvailablePositive6025867 - 602684232155.6
sulfurtransferase tusaB7H19_29150Not AvailableNegative6026843 - 60269543819.77
23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmmB7H19_29155Not AvailableNegative6027118 - 602818240047.6

Displaying genes 5681 – 5690 of 5826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total