Pseudomonas putida strain DZ-F23

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain DZ-F23 is a gram-negative, rod-shaped bacterium that thrives in soil and wastewater environments. This organism is classified as a heterotroph, utilizing organic compounds as its energy source. It exhibits facultative anaerobic characteristics, allowing it to adapt to varying oxygen levels. The cells are typically found as singles and possess flagella, which contribute to their mobility. Strain DZ-F23 is mesophilic, indicating that it grows optimally at moderate temperatures. It contains a single replicon and is characterized by a double membrane structure, consistent with its classification within the Pseudomonas genus. Notably, this strain is free-living and has a diverse range of potential hosts, including various plants (e.g., Triticum aestivum, Solanum lycopersicum, Oryza sativa) and animals (e.g., Homo sapiens, Struthio camelus). While Pseudomonas putida is primarily known for its beneficial roles in bioremediation and plant growth promotion, it has also been associated with nosocomial infections in animals, highlighting its potential pathogenicity. This dual role underscores the ecological importance of strain DZ-F23, as it can contribute to both the health of ecosystems and the risk of disease in specific contexts. Understanding this balance is vital for managing its presence in agricultural and clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain DZ-F23

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain DZ-F23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain DZ-F23 BN4_667_1__paired__contig_120,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5514 genes

Non-Coding Genes

310 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron(iii) abc transporterB7H19_01060Not AvailableNegative239827 - 24071132561.5
heme abc transporter atp-binding proteinB7H19_01065Not AvailableNegative240816 - 24158327812.8
abc transporter permeaseB7H19_01070Not AvailableNegative241583 - 24262035796.2
hemin abc transporter substrate-binding proteinB7H19_01075Not AvailableNegative242617 - 24350130709.1
mfs transporterB7H19_01080Not AvailablePositive243649 - 24396611612.8
sugar fermentation stimulation protein sfsaB7H19_01085Not AvailableNegative243956 - 24466925985.2
aminotransferaseB7H19_01090Not AvailableNegative244669 - 24584142493.8
rna polymerase-binding protein dksaB7H19_01095Not AvailablePositive246052 - 24649817132.4
trna glutamyl-q synthetaseB7H19_01100Not AvailablePositive246562 - 24744933238.7
atpaseB7H19_01105Not AvailablePositive247860 - 250829109068.0

Displaying genes 551 – 560 of 5826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total