Escherichia coli strain Ec39590

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Ec39590 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic lifestyle. It is capable of existing in pairs or as single cells and possesses flagella, enabling mobility. This strain thrives optimally at 37°C and falls within the mesophilic temperature range. Ec39590 is notable for having a single replicon and is characterized by its double membrane structure. This strain is primarily host-associated, with a diverse range of potential hosts including Homo sapiens, various livestock such as Bos taurus and Sus scrofa, and other animals including Aves and Felis catus. It is also associated with several plant species, indicating a broad ecological relationship. Ec39590 is classified as free-living, suggesting a capacity to survive outside host organisms. The health implications of E. coli strain Ec39590 are significant, as it is known to cause various infections in humans, including urinary tract infections, gastrointestinal diseases, and neonatal meningitis. It is implicated in severe health conditions such as hemolytic uremic syndrome (HUS) and can lead to complications like renal failure and sepsis. The strain's pathogenicity highlights its role in both foodborne infections and nosocomial diseases. Ecologically, the broad host range of E. coli strain Ec39590 suggests a versatile adaptability in different environments, which may facilitate its transmission and persistence in various ecosystems. Understanding its interactions with both animal and plant hosts could provide insights into its ecological impact and inform strategies for managing its pathogenic effects.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Ec39590

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Ec39590
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Ec39590


Gene Summary

Adenine Count

1329866 bp

Thymine Count

1331627 bp

Guanine Count

1348644 bp

Cytosine Count

1353156 bp

Genome Length

5363293 bp

Protein-coding Genes

5172 genes

Non-Coding Genes

180 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1002602 - 1002613Not Available
Tail fiber assemblyB7C53_04750Not AvailableNegative1003353 - 100388020370.1
Tail fiberB7C53_04755Not AvailableNegative1003884 - 100613079773.1
Baseplate assemblyB7C53_04760Not AvailableNegative1006141 - 100667119585.4
Baseplate assembly proteinB7C53_04765Not AvailableNegative1006664 - 100757232838.8
Baseplate wedge subunitB7C53_04770Not AvailableNegative1007577 - 100792412622.3
Baseplate proteinB7C53_04775Not AvailableNegative1007921 - 100855622220.5
Tail completion proteinB7C53_04780Not AvailableNegative1008623 - 100907517255.9
Tail completion proteinB7C53_04785Not AvailableNegative1009068 - 100953517379.8
LyscB7C53_04790Not AvailableNegative1009498 - 10096716158.16

Displaying genes 1 – 10 of 5352 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total