Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase i | B7C53_04100 | Not Available | Positive | 865529 - 868126 | 97356.0 |
| lysr family transcriptional regulator cysb | B7C53_04110 | Not Available | Positive | 868336 - 869310 | 36152.5 |
| ymia family putative membrane protein | B7C53_04115 | Not Available | Positive | 869605 - 869769 | 6232.76 |
| hypothetical protein | B7C53_04120 | Not Available | Positive | 869772 - 869939 | 6338.19 |
| hypothetical protein | B7C53_04125 | Not Available | Positive | 870076 - 870258 | 6538.04 |
| aconitate hydratase 1 | B7C53_04130 | Not Available | Positive | 870312 - 872987 | 97710.8 |
| gtp cyclohydrolase ii | B7C53_04135 | Not Available | Negative | 873051 - 873641 | 21837.3 |
| phosphatidylglycerophosphatase b | B7C53_04140 | Not Available | Positive | 873811 - 874575 | 29022.8 |
| lps assembly protein a | B7C53_04145 | Not Available | Positive | 874724 - 875032 | 11352.1 |
| lps assembly protein b | B7C53_04150 | Not Available | Positive | 875039 - 876208 | 44533.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





