Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna utilization protein hofn | B7C53_02810 | Not Available | Positive | 605986 - 606525 | 20911.3 |
| dna utilization protein hofo | B7C53_02815 | Not Available | Positive | 606509 - 606949 | 16950.2 |
| dna utilization protein hofp | B7C53_02820 | Not Available | Positive | 606939 - 607343 | 15099.1 |
| dna transporter hofq | B7C53_02825 | Not Available | Positive | 607255 - 608493 | 44764.9 |
| shikimate kinase | B7C53_02830 | Not Available | Positive | 608894 - 609415 | 19539.2 |
| 3-dehydroquinate synthase | B7C53_02835 | Not Available | Positive | 609472 - 610560 | 38883.4 |
| protein damx | B7C53_02840 | Not Available | Positive | 610652 - 611938 | 46092.2 |
| dna adenine methylase | B7C53_02845 | Not Available | Positive | 612045 - 612881 | 32087.2 |
| ribulose-phosphate 3-epimerase | B7C53_02850 | Not Available | Positive | 612899 - 613576 | 24555.7 |
| phosphoglycolate phosphatase | B7C53_02855 | Not Available | Positive | 613569 - 614327 | 27348.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





