Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | B7C53_01940 | Not Available | Positive | 418557 - 420059 | 56078.1 |
| l-ribulose-5-phosphate 4-epimerase | B7C53_01945 | Not Available | Positive | 420259 - 420954 | 25533.4 |
| dna polymerase ii | B7C53_01950 | Not Available | Positive | 421029 - 423380 | 90039.6 |
| rna polymerase-associated protein rapa | B7C53_01955 | Not Available | Positive | 423544 - 426450 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | B7C53_01960 | Not Available | Positive | 426462 - 427121 | 24862.1 |
| udp pyrophosphate phosphatase | B7C53_01965 | Not Available | Negative | 427539 - 428291 | 27879.6 |
| molecular chaperone djla | B7C53_01970 | Not Available | Negative | 428586 - 429401 | 30567.2 |
| lps assembly protein lptd | B7C53_01975 | Not Available | Positive | 429656 - 432025 | 90189.4 |
| chaperone sura | B7C53_01980 | Not Available | Positive | 432078 - 433364 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | B7C53_01985 | Not Available | Positive | 433364 - 434353 | 35170.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





