Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-1 fimbrial protein subunit a | B7C53_22845 | Not Available | Negative | 4560920 - 4561468 | 18110.2 |
| outer membrane protein slp | B7C53_22850 | Not Available | Positive | 4561849 - 4562415 | 20949.1 |
| dctr protein | B7C53_22855 | Not Available | Positive | 4562456 - 4562632 | 6698.34 |
| helix-turn-helix transcriptional regulator | B7C53_22860 | Not Available | Positive | 4562571 - 4563101 | 20452.5 |
| hemin-degrading factor | B7C53_22865 | Not Available | Negative | 4563162 - 4564190 | 38720.0 |
| ligand-gated channel protein | B7C53_22870 | Not Available | Negative | 4564239 - 4566221 | 72505.0 |
| hemin abc transporter substrate-binding protein | B7C53_22880 | Not Available | Positive | 4566825 - 4567817 | 36061.6 |
| putative heme utilization radical sam enzyme hutw | B7C53_22885 | Not Available | Positive | 4567837 - 4569174 | 49590.3 |
| heme utilization carrier protein | B7C53_22890 | Not Available | Positive | 4569187 - 4569681 | 18389.9 |
| hypothetical protein | B7C53_22895 | Not Available | Positive | 4569681 - 4570304 | 21829.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





