Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease | B7C53_22165 | Not Available | Negative | 4431117 - 4431974 | 32210.3 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | B7C53_22170 | Not Available | Negative | 4431958 - 4433094 | 43030.8 |
| hypothetical protein | B7C53_22175 | Not Available | Negative | 4433073 - 4433324 | 9847.1 |
| peptidase t | B7C53_22180 | Not Available | Positive | 4433344 - 4434570 | 44912.0 |
| 50s ribosomal protein l16 arginine hydroxylase | B7C53_22185 | Not Available | Negative | 4434619 - 4435740 | 42567.2 |
| sensor protein phoq | B7C53_22190 | Not Available | Negative | 4435816 - 4437276 | 55332.9 |
| two-component system response regulator phop | B7C53_22195 | Not Available | Negative | 4437276 - 4437947 | 25536.7 |
| adenylosuccinate lyase | B7C53_22200 | Not Available | Negative | 4438115 - 4439485 | 51572.7 |
| lysogenization protein hfld | B7C53_22205 | Not Available | Negative | 4439489 - 4440130 | 22949.0 |
| trna 2-thiouridine(34) synthase mnma | B7C53_22210 | Not Available | Negative | 4440166 - 4441272 | 40975.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





