Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | B7C53_21815 | Not Available | Positive | 4383816 - 4384574 | 28655.9 |
| hypothetical protein | B7C53_21820 | Not Available | Positive | 4384575 - 4384802 | 8449.1 |
| pilus assembly protein | B7C53_21825 | Not Available | Positive | 4384812 - 4385945 | 39842.8 |
| pilus assembly protein | B7C53_21830 | Not Available | Positive | 4386190 - 4386903 | 26908.1 |
| conjugal transfer protein | B7C53_21835 | Not Available | Positive | 4386908 - 4387837 | 35080.5 |
| type iv secretion system protein virb10 | B7C53_21840 | Not Available | Positive | 4387834 - 4389039 | 43254.1 |
| p-type dna transfer atpase virb11 | B7C53_21845 | Not Available | Positive | 4389041 - 4390072 | 39061.3 |
| conjugal transfer protein trag | B7C53_21850 | Not Available | Positive | 4390069 - 4391910 | 69554.4 |
| conjugal transfer protein | B7C53_21855 | Not Available | Positive | 4391907 - 4392320 | 16063.3 |
| conjugal transfer protein | B7C53_21860 | Not Available | Positive | 4392317 - 4392619 | 10845.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





