Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | B7C53_21295 | Not Available | Positive | 4291921 - 4292811 | 32624.8 |
| peptide abc transporter atp-binding protein | B7C53_21300 | Not Available | Negative | 4292848 - 4293774 | 34543.1 |
| abc transporter atp-binding protein | B7C53_21305 | Not Available | Negative | 4293767 - 4294753 | 36096.1 |
| d-ala-d-ala transporter subunit | B7C53_21310 | Not Available | Negative | 4294750 - 4295646 | 31858.8 |
| peptide abc transporter permease | B7C53_21315 | Not Available | Negative | 4295643 - 4296665 | 37423.4 |
| d-alanyl-d-alanine dipeptidase | B7C53_21325 | Not Available | Negative | 4298229 - 4298810 | 21228.2 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | B7C53_21330 | Not Available | Negative | 4299068 - 4301467 | 90243.5 |
| diguanylate cyclase | B7C53_21335 | Not Available | Negative | 4301492 - 4302874 | 53179.7 |
| hypothetical protein | B7C53_21340 | Not Available | Negative | 4303251 - 4304570 | 49547.8 |
| glutamate:gamma-aminobutyrate antiporter | B7C53_21345 | Not Available | Negative | 4304701 - 4306236 | 55080.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





