Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | B7C53_21190 | Not Available | Negative | 4271245 - 4272333 | 39828.5 |
| duf421 domain-containing protein | B7C53_21195 | Not Available | Negative | 4272532 - 4273224 | 26283.5 |
| ribosomal protein s12 methylthiotransferase accessory factor ycao | B7C53_21200 | Not Available | Positive | 4273354 - 4275114 | 65655.0 |
| eama family transporter | B7C53_21205 | Not Available | Negative | 4275440 - 4276321 | 31546.3 |
| sulfate abc transporter substrate-binding protein | B7C53_21210 | Not Available | Positive | 4276553 - 4277140 | 21465.8 |
| formate dehydrogenase-n subunit alpha | B7C53_21215 | Not Available | Positive | 4277189 - 4279600 | 89856.9 |
| formate dehydrogenase nitrate-inducible iron-sulfur subunit | B7C53_21220 | Not Available | Positive | 4279613 - 4280497 | 32240.4 |
| formate dehydrogenase nitrate-inducible cytochrome b556(fdn) subunit | B7C53_21225 | Not Available | Positive | 4280490 - 4281143 | 25370.0 |
| transcriptional regulator | B7C53_21230 | Not Available | Negative | 4281372 - 4281656 | 10401.7 |
| zinc-dependent alcohol dehydrogenase | B7C53_21235 | Not Available | Negative | 4281803 - 4282813 | 35352.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





