Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | B7C53_21035 | Not Available | Negative | 4234013 - 4235335 | 47210.9 |
| inner membrane protein yhjd | B7C53_21040 | Not Available | Negative | 4235747 - 4236760 | 37871.5 |
| lysr family transcriptional regulator | B7C53_21045 | Not Available | Negative | 4236809 - 4237708 | 33324.5 |
| helix-turn-helix transcriptional regulator | B7C53_21050 | Not Available | Positive | 4238228 - 4238830 | 22593.5 |
| trehalase | B7C53_21055 | Not Available | Negative | 4238881 - 4240530 | 63700.1 |
| cytochrome-c peroxidase | B7C53_21060 | Not Available | Positive | 4240935 - 4242332 | 51543.3 |
| glutamate decarboxylase | B7C53_21065 | Not Available | Positive | 4242543 - 4242926 | 14530.0 |
| phosphoporin phoe | B7C53_21070 | Not Available | Positive | 4243191 - 4244264 | 38676.7 |
| hypothetical protein | B7C53_21075 | Not Available | Negative | 4244280 - 4244462 | 7100.75 |
| aspartate aminotransferase | B7C53_21080 | Not Available | Positive | 4244449 - 4245639 | 43575.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





