Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxosome protein tray | B7C53_20475 | Not Available | Positive | 4118817 - 4119212 | 15184.2 |
| pilin | B7C53_20480 | Not Available | Positive | 4119245 - 4119610 | 12769.3 |
| conjugal transfer pilus assembly protein tral | B7C53_20485 | Not Available | Positive | 4119625 - 4119936 | 11904.7 |
| protein trae | B7C53_20490 | Not Available | Positive | 4119958 - 4120524 | 21225.5 |
| conjugal transfer protein trak | B7C53_20495 | Not Available | Positive | 4120511 - 4121239 | 25628.6 |
| protein trab | B7C53_20500 | Not Available | Positive | 4121239 - 4122666 | 50462.8 |
| conjugal transfer protein trap | B7C53_20505 | Not Available | Positive | 4122656 - 4123246 | 22020.7 |
| conjugal transfer protein trbd | B7C53_20510 | Not Available | Positive | 4123200 - 4123430 | 8318.05 |
| protein trbg | B7C53_20515 | Not Available | Positive | 4123442 - 4123693 | 9126.86 |
| type iv conjugative transfer system protein trav | B7C53_20520 | Not Available | Positive | 4123690 - 4124205 | 18497.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





