Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flha | B7C53_19705 | Not Available | Negative | 3974406 - 3976499 | 75650.5 |
| flagellar biosynthesis protein flhb | B7C53_19710 | Not Available | Negative | 3976483 - 3977622 | 42776.7 |
| flagellar biosynthetic protein flir | B7C53_19715 | Not Available | Negative | 3977612 - 3978394 | 28721.3 |
| flagellar biosynthetic protein fliq | B7C53_19720 | Not Available | Negative | 3978396 - 3978668 | 9684.52 |
| flagellar biosynthetic protein flip | B7C53_19725 | Not Available | Negative | 3978671 - 3979423 | 27172.9 |
| hypothetical protein | B7C53_19730 | Not Available | Negative | 3979420 - 3979791 | 13641.4 |
| hypothetical protein | B7C53_19735 | Not Available | Negative | 3979784 - 3980635 | 31594.4 |
| sigma-54-dependent fis family transcriptional regulator | B7C53_19740 | Not Available | Positive | 3981023 - 3982009 | 36402.2 |
| flagellar hook-basal body protein flie | B7C53_19745 | Not Available | Positive | 3982024 - 3982365 | 12183.6 |
| flagellar m-ring protein flif | B7C53_19750 | Not Available | Positive | 3982370 - 3984025 | 60038.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





