Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose isomerase | B7C53_19445 | Not Available | Positive | 3923721 - 3924875 | 41784.8 |
| tagatose-1,6-bisphosphate aldolase | B7C53_19450 | Not Available | Positive | 3924888 - 3925748 | 31295.4 |
| pts n-acetylgalactosamine transporter subunit iib | B7C53_19455 | Not Available | Positive | 3925915 - 3926391 | 17507.2 |
| n-acetylgalactosamine permease iic component 1 | B7C53_19460 | Not Available | Positive | 3926430 - 3927233 | 28646.5 |
| pts n-acetylgalactosamine transporter subunit iid | B7C53_19465 | Not Available | Positive | 3927223 - 3928014 | 28976.1 |
| galactosamine-6-phosphate isomerase | B7C53_19470 | Not Available | Positive | 3928015 - 3928770 | 27783.5 |
| gntr family transcriptional regulator | B7C53_19475 | Not Available | Positive | 3929208 - 3929900 | 26076.5 |
| mfs transporter | B7C53_19480 | Not Available | Positive | 3929923 - 3931350 | 51494.9 |
| ribose operon repressor | B7C53_19485 | Not Available | Negative | 3931316 - 3932308 | 36614.1 |
| ribokinase | B7C53_19490 | Not Available | Negative | 3932312 - 3933241 | 32292.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





