Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine dehydratase | B7C53_19340 | Not Available | Negative | 3904705 - 3905694 | 35218.5 |
| transcriptional regulator tdca | B7C53_19345 | Not Available | Negative | 3905793 - 3906731 | 34568.9 |
| transcriptional regulator | B7C53_19350 | Not Available | Positive | 3906920 - 3907264 | 13553.3 |
| hypothetical protein | B7C53_19355 | Not Available | Positive | 3907520 - 3908059 | 20550.6 |
| hypothetical protein | B7C53_19360 | Not Available | Positive | 3908081 - 3909268 | 45238.4 |
| glycerate 2-kinase | B7C53_19370 | Not Available | Negative | 3910065 - 3911210 | 39064.6 |
| 2-hydroxy-3-oxopropionate reductase | B7C53_19375 | Not Available | Negative | 3911307 - 3912197 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | B7C53_19380 | Not Available | Negative | 3912227 - 3912997 | 27472.7 |
| mfs transporter | B7C53_19385 | Not Available | Negative | 3913013 - 3914347 | 48970.0 |
| d-galactarate dehydratase | B7C53_19390 | Not Available | Positive | 3914722 - 3916293 | 56390.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





