Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | B7C53_19290 | Not Available | Negative | 3892985 - 3893881 | 33231.3 |
| pirin-like protein yhak | B7C53_19295 | Not Available | Positive | 3893986 - 3894687 | 25897.0 |
| hypothetical protein | B7C53_19300 | Not Available | Positive | 3894710 - 3894874 | 5907.01 |
| hypothetical protein | B7C53_19305 | Not Available | Negative | 3895008 - 3896318 | 45304.8 |
| transporter | B7C53_19310 | Not Available | Negative | 3896346 - 3897677 | 48317.6 |
| l-serine ammonia-lyase | B7C53_19315 | Not Available | Negative | 3897951 - 3899315 | 48538.6 |
| reactive intermediate/imine deaminase | B7C53_19320 | Not Available | Negative | 3899387 - 3899776 | 14008.0 |
| formate acetyltransferase | B7C53_19325 | Not Available | Negative | 3899790 - 3902084 | 86014.5 |
| propionate/acetate kinase | B7C53_19330 | Not Available | Negative | 3902118 - 3903326 | 43416.7 |
| threonine/serine transporter tdcc | B7C53_19335 | Not Available | Negative | 3903352 - 3904683 | 48895.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





