Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | B7C53_18605 | Not Available | Negative | 3761864 - 3762799 | 34830.0 |
| lysr family transcriptional regulator | B7C53_18610 | Not Available | Negative | 3762958 - 3763884 | 34360.5 |
| alpha/beta hydrolase | B7C53_18615 | Not Available | Positive | 3764041 - 3764961 | 33267.6 |
| nadh:flavin oxidoreductase | B7C53_18620 | Not Available | Positive | 3765206 - 3766348 | 41841.2 |
| hypothetical protein | B7C53_18625 | Not Available | Positive | 3766822 - 3766923 | 3999.01 |
| 50s ribosomal protein l31 | B7C53_18635 | Not Available | Positive | 3767286 - 3767549 | 9876.7 |
| 50s ribosomal protein l36 | B7C53_18640 | Not Available | Positive | 3767549 - 3767689 | 5466.94 |
| helix-turn-helix transcriptional regulator | B7C53_18655 | Not Available | Positive | 3768724 - 3769314 | 23274.0 |
| common pilus major fimbrillin subunit ecpa | B7C53_18660 | Not Available | Positive | 3769389 - 3769976 | 20126.6 |
| hypothetical protein | B7C53_18665 | Not Available | Positive | 3770034 - 3770702 | 24532.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





