Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase small subunit | B7C53_18340 | Not Available | Negative | 3715284 - 3716582 | 47546.0 |
| spovr family protein | B7C53_18345 | Not Available | Positive | 3716912 - 3718444 | 60837.1 |
| fatty acid metabolism transcriptional regulator fadr | B7C53_18350 | Not Available | Negative | 3718496 - 3719215 | 26970.2 |
| na+/h+ antiporter nhab | B7C53_18355 | Not Available | Positive | 3719437 - 3720978 | 56731.8 |
| disulfide bond formation protein b | B7C53_18360 | Not Available | Positive | 3721124 - 3721654 | 20143.3 |
| dna polymerase v subunit umuc | B7C53_18365 | Not Available | Negative | 3721700 - 3722968 | 47686.4 |
| protein umud | B7C53_18370 | Not Available | Negative | 3722968 - 3723387 | 15064.2 |
| hemolysin e | B7C53_18375 | Not Available | Positive | 3723761 - 3724672 | 33732.3 |
| hypothetical protein | B7C53_18380 | Not Available | Negative | 3724879 - 3725340 | 17897.2 |
| isomerase/hydrolase | B7C53_18385 | Not Available | Negative | 3725417 - 3726076 | 23708.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





