Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-cystine abc transporter atp-binding protein yecc | B7C53_17575 | Not Available | Negative | 3573636 - 3574388 | 27678.7 |
| amino acid abc transporter permease | B7C53_17580 | Not Available | Negative | 3574385 - 3575053 | 24802.7 |
| aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase family protein | B7C53_17585 | Not Available | Negative | 3575068 - 3576054 | 35155.4 |
| cystine abc transporter substrate-binding protein | B7C53_17590 | Not Available | Negative | 3576159 - 3576959 | 28954.8 |
| flagellar regulatory protein fliz | B7C53_17595 | Not Available | Negative | 3577047 - 3577598 | 21541.9 |
| rna polymerase sigma factor flia | B7C53_17600 | Not Available | Negative | 3577644 - 3578363 | 27522.8 |
| flagellin | B7C53_17605 | Not Available | Negative | 3578683 - 3580320 | 55926.9 |
| flagellar filament capping protein flid | B7C53_17615 | Not Available | Positive | 3580586 - 3581992 | 48486.1 |
| flagellar export chaperone flis | B7C53_17620 | Not Available | Positive | 3582017 - 3582427 | 15050.1 |
| flagellar protein flit | B7C53_17625 | Not Available | Positive | 3582427 - 3582792 | 13783.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





