Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | B7C53_16955 | Not Available | Negative | 3446525 - 3447280 | 29280.9 |
| dead/deah box helicase | B7C53_16960 | Not Available | Negative | 3447277 - 3450561 | 124077.0 |
| hypothetical protein | B7C53_16965 | Not Available | Negative | 3450614 - 3451297 | 25666.7 |
| hypothetical protein | B7C53_16970 | Not Available | Negative | 3451294 - 3452457 | 42853.3 |
| type i restriction-modification system subunit m | B7C53_16975 | Not Available | Negative | 3452447 - 3453970 | 57224.9 |
| hypothetical protein | B7C53_16980 | Not Available | Positive | 3454343 - 3455509 | 45336.5 |
| hypothetical protein | B7C53_16985 | Not Available | Positive | 3455912 - 3457042 | 43070.6 |
| integrase | B7C53_16990 | Not Available | Positive | 3457185 - 3458312 | 42973.1 |
| helix-turn-helix domain-containing protein | B7C53_16995 | Not Available | Positive | 3458463 - 3458663 | 7581.07 |
| hypothetical protein | B7C53_17000 | Not Available | Positive | 3458653 - 3459291 | 23851.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





