Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| motility protein b | B7C53_16850 | Not Available | Negative | 3427835 - 3428761 | 34188.1 |
| motility protein a | B7C53_16855 | Not Available | Negative | 3428758 - 3429645 | 31999.4 |
| flagellar transcriptional regulator flhc | B7C53_16860 | Not Available | Negative | 3429772 - 3430350 | 21567.3 |
| flagellar transcriptional activator flhd | B7C53_16865 | Not Available | Negative | 3430353 - 3430703 | 13317.2 |
| universal stress protein uspc | B7C53_16870 | Not Available | Positive | 3431483 - 3431911 | 15669.9 |
| trehalose-6-phosphate synthase | B7C53_16875 | Not Available | Negative | 3431918 - 3433342 | 53614.1 |
| trehalose-phosphatase | B7C53_16880 | Not Available | Negative | 3433317 - 3434117 | 29219.0 |
| l-arabinose abc transporter permease arah | B7C53_16885 | Not Available | Negative | 3434284 - 3435270 | 34227.1 |
| arabinose import atp-binding protein arag | B7C53_16890 | Not Available | Negative | 3435285 - 3436799 | 55021.6 |
| arabinose abc transporter substrate-binding protein | B7C53_16895 | Not Available | Negative | 3436869 - 3437858 | 35542.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





