Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter substrate-binding protein | B7C53_15255 | Not Available | Negative | 3087847 - 3088863 | 37434.6 |
| phosphonate abc transporter atp-binding protein | B7C53_15260 | Not Available | Negative | 3088888 - 3089676 | 29654.7 |
| voc family protein | B7C53_15265 | Not Available | Negative | 3089809 - 3090252 | 16172.2 |
| protein phna | B7C53_15270 | Not Available | Negative | 3090617 - 3090952 | 12345.7 |
| hypothetical protein | B7C53_15275 | Not Available | Positive | 3090924 - 3091136 | 8087.11 |
| clamp-binding protein crfc | B7C53_15280 | Not Available | Positive | 3091354 - 3093582 | 84459.1 |
| hypothetical protein | B7C53_15285 | Not Available | Positive | 3093579 - 3094457 | 32855.6 |
| proline/betaine transporter | B7C53_15290 | Not Available | Positive | 3094721 - 3096223 | 54920.2 |
| pmrr protein | B7C53_15295 | Not Available | Positive | 3096335 - 3096424 | 3449.23 |
| two-component sensor histidine kinase | B7C53_15300 | Not Available | Negative | 3096400 - 3097491 | 40943.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





