Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | B7C53_14895 | Not Available | Negative | 3015873 - 3017237 | 49215.7 |
| membrane protein insertase yidc | B7C53_14900 | Not Available | Negative | 3017343 - 3018989 | 61587.5 |
| membrane protein insertion efficiency factor yidd | B7C53_14905 | Not Available | Negative | 3018992 - 3019249 | 9381.61 |
| ribonuclease p protein component | B7C53_14910 | Not Available | Negative | 3019213 - 3019572 | 13790.0 |
| 50s ribosomal protein l34 | B7C53_14915 | Not Available | Negative | 3019589 - 3019729 | 5380.74 |
| hypothetical protein | B7C53_14920 | Not Available | Positive | 3019842 - 3020042 | 7436.9 |
| chromosomal replication initiator protein dnaa | B7C53_14925 | Not Available | Positive | 3020336 - 3021739 | 52553.7 |
| dna polymerase iii subunit beta | B7C53_14930 | Not Available | Positive | 3021744 - 3022844 | 40589.1 |
| dna replication and repair protein recf | B7C53_14935 | Not Available | Positive | 3022844 - 3023917 | 40516.4 |
| dna gyrase subunit b | B7C53_14940 | Not Available | Positive | 3023946 - 3026360 | 89954.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





