Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator kdgr | B7C53_14595 | Not Available | Negative | 2954321 - 2955112 | 30031.1 |
| mfs transporter | B7C53_14600 | Not Available | Positive | 2955289 - 2956662 | 48168.8 |
| protease htpx | B7C53_14605 | Not Available | Negative | 2956711 - 2957592 | 31959.3 |
| tail-specific protease | B7C53_14610 | Not Available | Negative | 2957784 - 2959832 | 76637.3 |
| rna chaperone proq | B7C53_14615 | Not Available | Negative | 2959852 - 2960550 | 25835.9 |
| free methionine-r-sulfoxide reductase | B7C53_14620 | Not Available | Negative | 2960647 - 2961144 | 18080.5 |
| paraquat-inducible membrane protein a | B7C53_14625 | Not Available | Positive | 2961274 - 2962557 | 48276.3 |
| mce family protein | B7C53_14630 | Not Available | Positive | 2962526 - 2965159 | 94979.0 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | B7C53_14635 | Not Available | Positive | 2965239 - 2966678 | 53252.4 |
| hypothetical protein | B7C53_14640 | Not Available | Positive | 2966795 - 2967031 | 8753.26 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





