Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | B7C53_13255 | Not Available | Positive | 2715290 - 2716180 | 32812.2 |
| 3-phenylpropionate mfs transporter | B7C53_13260 | Not Available | Positive | 2716340 - 2717479 | 41623.2 |
| stationary phase inducible protein csie | B7C53_13265 | Not Available | Negative | 2717471 - 2718751 | 49043.4 |
| alpha/beta hydrolase | B7C53_13270 | Not Available | Negative | 2718942 - 2719796 | 31461.6 |
| inositol monophosphatase | B7C53_13275 | Not Available | Negative | 2719941 - 2720744 | 29173.8 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | B7C53_13280 | Not Available | Positive | 2720863 - 2721603 | 27049.6 |
| fe-s cluster assembly transcriptional regulator iscr | B7C53_13285 | Not Available | Positive | 2721873 - 2722361 | 17337.6 |
| iscs subfamily cysteine desulfurase | B7C53_13290 | Not Available | Positive | 2722477 - 2723691 | 45092.2 |
| iron-sulfur cluster scaffold-like protein | B7C53_13295 | Not Available | Positive | 2723719 - 2724105 | 13849.3 |
| iron-sulfur cluster assembly protein isca | B7C53_13300 | Not Available | Positive | 2724122 - 2724445 | 11586.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





