Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtw domain-containing protein | B7C53_13000 | Not Available | Negative | 2664556 - 2665254 | 25982.4 |
| thiol disulfide reductase thioredoxin | B7C53_13005 | Not Available | Negative | 2665323 - 2665742 | 15555.6 |
| hypothetical protein | B7C53_13010 | Not Available | Positive | 2665756 - 2665959 | 7646.15 |
| trna/rrna methyltransferase | B7C53_13015 | Not Available | Positive | 2665949 - 2666986 | 37800.5 |
| uracil-dna glycosylase | B7C53_13020 | Not Available | Negative | 2667034 - 2667723 | 25682.6 |
| autonomous glycyl radical cofactor grca | B7C53_13025 | Not Available | Positive | 2668028 - 2668411 | 14269.0 |
| amino acid transporter | B7C53_13030 | Not Available | Negative | 2668467 - 2669054 | 21321.6 |
| lysr family transcriptional regulator | B7C53_13035 | Not Available | Positive | 2669157 - 2670038 | 33364.3 |
| atp-dependent rna helicase srmb | B7C53_13040 | Not Available | Negative | 2670071 - 2671405 | 49901.0 |
| trna (adenosine(37)-n6)-methyltransferase trmm | B7C53_13045 | Not Available | Positive | 2671537 - 2672274 | 27197.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





