Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-damage-inducible protein i | B7C53_12340 | Not Available | Negative | 2533011 - 2533256 | 8949.43 |
| dihydroorotase | B7C53_12345 | Not Available | Negative | 2533330 - 2534376 | 38838.6 |
| lipoprotein | B7C53_12350 | Not Available | Negative | 2534482 - 2535042 | 20501.0 |
| glutaredoxin 2 | B7C53_12355 | Not Available | Negative | 2535176 - 2535823 | 24351.6 |
| multidrug resistance protein mdth | B7C53_12360 | Not Available | Negative | 2535887 - 2537095 | 44366.0 |
| ribosomal protein s5 alanine n-acetyltransferase | B7C53_12365 | Not Available | Positive | 2537331 - 2537915 | 22689.1 |
| duf480 domain-containing protein | B7C53_12370 | Not Available | Positive | 2537926 - 2538573 | 24166.8 |
| virulence factor mvim | B7C53_12375 | Not Available | Positive | 2538575 - 2539498 | 33674.4 |
| lipid ii flippase murj | B7C53_12380 | Not Available | Positive | 2539608 - 2541143 | 55284.8 |
| flagellar biosynthesis protein flgn | B7C53_12385 | Not Available | Negative | 2541183 - 2541599 | 15897.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





