Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein hypa | B7C53_11970 | Not Available | Positive | 2472864 - 2473214 | 13168.9 |
| hydrogenase accessory protein hypb | B7C53_11975 | Not Available | Positive | 2473218 - 2474090 | 31579.8 |
| hydrogenase assembly protein hypc | B7C53_11980 | Not Available | Positive | 2474081 - 2474353 | 9732.58 |
| hydrogenase formation protein hypd | B7C53_11985 | Not Available | Positive | 2474353 - 2475474 | 41366.7 |
| hydrogenase expression/formation protein hype | B7C53_11990 | Not Available | Positive | 2475471 - 2476481 | 35126.6 |
| formate hydrogenlyase transcriptional activator | B7C53_11995 | Not Available | Positive | 2476555 - 2478633 | 78415.4 |
| hypothetical protein | B7C53_12000 | Not Available | Negative | 2478670 - 2479023 | 13904.1 |
| hypothetical protein | B7C53_12005 | Not Available | Negative | 2479055 - 2479234 | 6752.81 |
| dna mismatch repair protein muts | B7C53_12010 | Not Available | Positive | 2479310 - 2481871 | 95247.5 |
| serine/threonine protein phosphatase | B7C53_12015 | Not Available | Positive | 2481977 - 2482633 | 25083.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





