Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| effector protein | B7C53_11560 | Not Available | Negative | 2398768 - 2399256 | 17530.4 |
| oxidoreductase (fe-s)-binding subunit | B7C53_11565 | Not Available | Negative | 2399256 - 2401175 | 69100.9 |
| purine permease ygfu | B7C53_11570 | Not Available | Positive | 2401478 - 2401564 | 3132.76 |
| uric acid transporter uact | B7C53_11575 | Not Available | Positive | 2401611 - 2403059 | 51761.4 |
| hypothetical protein | B7C53_11580 | Not Available | Positive | 2403061 - 2403186 | 4791.29 |
| isopentenyl-diphosphate delta-isomerase | B7C53_11585 | Not Available | Positive | 2403309 - 2403857 | 20540.4 |
| lysine--trna ligase | B7C53_11590 | Not Available | Negative | 2403900 - 2405417 | 57606.8 |
| single-stranded-dna-specific exonuclease recj | B7C53_11600 | Not Available | Negative | 2406616 - 2408349 | 63322.5 |
| thiol:disulfide interchange protein dsbc | B7C53_11605 | Not Available | Negative | 2408355 - 2409065 | 25637.1 |
| site-specific tyrosine recombinase xerd | B7C53_11610 | Not Available | Negative | 2409090 - 2409986 | 34264.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





