Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | B7C53_11405 | Not Available | Negative | 2358514 - 2359389 | 33529.6 |
| type iii secretion protein | B7C53_11410 | Not Available | Negative | 2359367 - 2359834 | 18646.7 |
| escn/yscn/hrcn family type iii secretion system atpase | B7C53_11415 | Not Available | Negative | 2359815 - 2361134 | 48549.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | B7C53_11420 | Not Available | Negative | 2361139 - 2363199 | 76409.5 |
| type iii secretion system protein | B7C53_11425 | Not Available | Negative | 2363192 - 2364337 | 43548.6 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | B7C53_11430 | Not Available | Negative | 2364342 - 2366045 | 62739.4 |
| arac family transcriptional regulator | B7C53_11435 | Not Available | Negative | 2366042 - 2366791 | 28286.4 |
| hypothetical protein | B7C53_11440 | Not Available | Negative | 2367137 - 2367316 | 6642.54 |
| hypothetical protein | B7C53_11445 | Not Available | Negative | 2367383 - 2369035 | 62255.0 |
| Trna-gly | Not Available | Not Available | Positive | 2369227 - 2369300 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





