Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | B7C53_11350 | Not Available | Negative | 2351112 - 2351846 | 27609.7 |
| hypothetical protein | B7C53_11355 | Not Available | Negative | 2351843 - 2352175 | 12299.7 |
| escf/yscf/hrpa family type iii secretion system needle major subunit | B7C53_11360 | Not Available | Negative | 2352195 - 2352434 | 9038.44 |
| type iii secretion protein | B7C53_11365 | Not Available | Negative | 2352447 - 2353637 | 45542.1 |
| luxr family transcriptional regulator | B7C53_11370 | Not Available | Positive | 2353886 - 2354386 | 19143.0 |
| invasion protein | B7C53_11375 | Not Available | Positive | 2354388 - 2354681 | 11102.3 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | B7C53_11380 | Not Available | Negative | 2354752 - 2355864 | 43024.9 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | B7C53_11385 | Not Available | Negative | 2355873 - 2356640 | 28182.7 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | B7C53_11390 | Not Available | Negative | 2356642 - 2356902 | 9430.85 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | B7C53_11395 | Not Available | Negative | 2356912 - 2357577 | 24496.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





