Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat proofreading chaperone dmsd | B7C53_11090 | Not Available | Positive | 2301123 - 2301737 | 23359.8 |
| voltage-gated clc-type chloride channel clcb | B7C53_11095 | Not Available | Positive | 2301896 - 2303188 | 45695.0 |
| dethiobiotin synthase | B7C53_11100 | Not Available | Negative | 2303141 - 2303836 | 24982.5 |
| transcriptional regulator | B7C53_11105 | Not Available | Negative | 2303961 - 2305181 | 44292.7 |
| lysr family transcriptional regulator | B7C53_11110 | Not Available | Negative | 2305316 - 2306209 | 33297.4 |
| mfs transporter | B7C53_11115 | Not Available | Positive | 2306316 - 2307569 | 45246.2 |
| acid-shock protein | B7C53_11125 | Not Available | Positive | 2307966 - 2308301 | 11538.0 |
| hypothetical protein | B7C53_11130 | Not Available | Positive | 2308394 - 2308477 | 3206.2 |
| serine protease | B7C53_11135 | Not Available | Positive | 2308577 - 2309398 | 29236.6 |
| spermidine export protein mdti | B7C53_11140 | Not Available | Negative | 2309437 - 2309766 | 11720.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





