Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose-proton symporter | B7C53_10160 | Not Available | Positive | 2119672 - 2120988 | 47547.6 |
| l-fucose isomerase | B7C53_10165 | Not Available | Positive | 2121021 - 2122796 | 64980.3 |
| l-fuculokinase | B7C53_10170 | Not Available | Positive | 2122905 - 2124323 | 52261.7 |
| l-fucose mutarotase | B7C53_10175 | Not Available | Positive | 2124325 - 2124747 | 15474.0 |
| l-fucose operon activator | B7C53_10180 | Not Available | Positive | 2124805 - 2125536 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | B7C53_10185 | Not Available | Negative | 2125580 - 2126680 | 41937.5 |
| hypothetical protein | B7C53_10190 | Not Available | Negative | 2126673 - 2127068 | 14334.0 |
| transcriptional regulator gcva | B7C53_10195 | Not Available | Negative | 2127087 - 2128004 | 34369.4 |
| ygdi/ygdr family lipoprotein | B7C53_10200 | Not Available | Negative | 2128355 - 2128582 | 8174.67 |
| cysteine desulfurase csda | B7C53_10205 | Not Available | Positive | 2128774 - 2129979 | 43278.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





