Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(65) synthase truc | B7C53_10110 | Not Available | Negative | 2108439 - 2109221 | 29667.5 |
| hypothetical protein | B7C53_10115 | Not Available | Negative | 2109221 - 2109550 | 12742.2 |
| protein syd | B7C53_10120 | Not Available | Negative | 2110172 - 2110717 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | B7C53_10125 | Not Available | Positive | 2110785 - 2111633 | 32560.1 |
| log family protein | B7C53_10130 | Not Available | Positive | 2111745 - 2113109 | 50989.1 |
| serine transporter | B7C53_10135 | Not Available | Positive | 2113666 - 2114955 | 46909.2 |
| l-serine ammonia-lyase | B7C53_10140 | Not Available | Positive | 2115013 - 2116380 | 48725.8 |
| flap endonuclease xni | B7C53_10145 | Not Available | Positive | 2116492 - 2117247 | 28167.7 |
| lactaldehyde reductase | B7C53_10150 | Not Available | Negative | 2117302 - 2118450 | 40537.8 |
| l-fuculose-phosphate aldolase | B7C53_10155 | Not Available | Negative | 2118478 - 2119125 | 23786.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





