Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription/translation regulatory transformer protein rfah | B7C53_09600 | Not Available | Positive | 2006309 - 2006797 | 18371.3 |
| hydrolase tatd | B7C53_09605 | Not Available | Negative | 2006794 - 2007576 | 29056.6 |
| twin-arginine translocase subunit tatc | B7C53_09610 | Not Available | Negative | 2007618 - 2008394 | 28877.9 |
| twin-arginine translocase subunit tatb | B7C53_09615 | Not Available | Negative | 2008397 - 2008912 | 18421.8 |
| twin-arginine translocase subunit tata | B7C53_09620 | Not Available | Negative | 2008916 - 2009185 | 9664.5 |
| ubiquinone biosynthesis protein ubib | B7C53_09625 | Not Available | Negative | 2009264 - 2010904 | 63190.3 |
| scp2 domain-containing protein | B7C53_09630 | Not Available | Negative | 2010901 - 2011506 | 22123.8 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | B7C53_09635 | Not Available | Negative | 2011520 - 2012275 | 28074.8 |
| dna recombination protein rmuc | B7C53_09640 | Not Available | Negative | 2012370 - 2013797 | 54797.7 |
| uridine phosphorylase | B7C53_09645 | Not Available | Negative | 2013938 - 2014699 | 27151.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





