Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ec39590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1329866 bp
Thymine Count
1331627 bp
Guanine Count
1348644 bp
Cytosine Count
1353156 bp
Genome Length
5363293 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | B7C53_09395 | Not Available | Negative | 1964321 - 1964533 | 7768.57 |
| cold-shock protein cspg | B7C53_09400 | Not Available | Positive | 1964819 - 1965031 | 7781.14 |
| cold-shock protein | B7C53_09405 | Not Available | Positive | 1965042 - 1965230 | 7104.55 |
| cold-shock protein | B7C53_09410 | Not Available | Positive | 1965205 - 1965435 | 8736.66 |
| protein gnsa | B7C53_09415 | Not Available | Positive | 1965425 - 1965598 | 6575.99 |
| electron transporter yccm | B7C53_09420 | Not Available | Negative | 1965647 - 1966720 | 40091.4 |
| tmao reductase system sensor histidine kinase/response regulator tors | B7C53_09425 | Not Available | Negative | 1966792 - 1969536 | 100799.0 |
| tmao reductase system periplasmic protein tort | B7C53_09430 | Not Available | Positive | 1969619 - 1970647 | 37895.9 |
| two-component system response regulator torr | B7C53_09435 | Not Available | Negative | 1970620 - 1971312 | 26270.9 |
| pentaheme c-type cytochrome torc | B7C53_09440 | Not Available | Positive | 1971442 - 1972614 | 43624.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





